Tea HapMap |
Chromosome Wise Haplotypes and InDels | ||||
| SL.No. | Chromosomes | SNPs | Filtered-SNPs | InDels |
| 1 | Chr1 | 1668182 | 188961 | 116446 |
| 2 | Chr2 | 1506224 | 173985 | 108657 |
| 3 | Chr3 | 1896105 | 224604 | 133270 |
| 4 | Chr4 | 1544905 | 166801 | 106047 |
| 5 | Chr5 | 1547141 | 169517 | 103636 |
| 6 | Chr6 | 1536492 | 172211 | 106925 |
| 7 | Chr7 | 1017115 | 116204 | 73450 |
| 8 | Chr8 | 1640672 | 185104 | 115819 |
| 9 | Chr9 | 1453772 | 152177 | 100909 |
| 10 | Chr10 | 1382429 | 153821 | 97298 |
| 11 | Chr11 | 990010 | 113954 | 69997 |
| 12 | Chr12 | 1275490 | 144366 | 88317 |
| 13 | Chr13 | 1041585 | 124659 | 76353 |
| 14 | Chr14 | 1229143 | 137783 | 84530 |
| 15 | Chr15 | 959799 | 110417 | 66331 |
| 16 | - | Consensus | Consensus | |
| The consensus variant lists for filtered-SNPs and InDels are available at European Variation Archive (EVA) EMBL-EBI under Project identifier PRJEB43159 with analysis accession number ERZ1741156. | ||||